Structural miRNA-lncRNA Interaction Database: Integrating Structural Insights for Enhanced Predictive Modeling

Cindy Calderón-Arce; Juan Luis Crespo-Marino; Rodrigo Mora-Rodriguez

doi:10.1109/CONCAPAN63470.2024.10933592

Structural miRNA-lncRNA Interaction Database: Integrating Structural Insights for Enhanced Predictive Modeling

Cindy Calderón-Arce
, Juan Luis Crespo-Marino
, Rodrigo Mora-Rodriguez

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Abstract

This work introduces a comprehensive miRNA-lncRNA interaction database that uniquely integrates structural information for both miRNAs and lncRNAs. The database includes extensive characterization of sequences, secondary structures, and interactions, enhancing its utility for predictive modeling in bioinformatics and systems biology. By providing a validated and detailed resource, such as lncRNASNP2-Human, this database aims to support and improve future predictions of miRNA-lncRNA interactions, with potential applications in disease research, particularly in cancer, and other areas of biomedical science. The construction and structure of the database are presented, along with a detailed description of the types of data it contains, and potential applications or uses of this database are mentioned at the end.

Original language	English
Title of host publication	2024 IEEE 42nd Central America and Panama Convention, CONCAPAN 2024
Publisher	Institute of Electrical and Electronics Engineers Inc.
Edition	2024
ISBN (Electronic)	9798350366723
DOIs	https://doi.org/10.1109/CONCAPAN63470.2024.10933592
State	Published - 2024
Externally published	Yes
Event	42nd IEEE Central America and Panama Convention, CONCAPAN 2024 - San Jose, Costa Rica Duration: 27 Nov 2024 → 29 Nov 2024

Conference

Conference	42nd IEEE Central America and Panama Convention, CONCAPAN 2024
Country/Territory	Costa Rica
City	San Jose
Period	27/11/24 → 29/11/24

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 3 Good Health and Well-being
SDG 7 Affordable and Clean Energy

Keywords

database
interaction characterization
interactions prediction
miRNA-lncRNA interaction
secondary structures
sequence characterization
structural characterization

Access to Document

10.1109/CONCAPAN63470.2024.10933592

Cite this

Calderón-Arce, C., Crespo-Marino, J. L., & Mora-Rodriguez, R. (2024). Structural miRNA-lncRNA Interaction Database: Integrating Structural Insights for Enhanced Predictive Modeling. In 2024 IEEE 42nd Central America and Panama Convention, CONCAPAN 2024 (2024 ed.). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/CONCAPAN63470.2024.10933592

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title = "Structural miRNA-lncRNA Interaction Database: Integrating Structural Insights for Enhanced Predictive Modeling",

abstract = "This work introduces a comprehensive miRNA-lncRNA interaction database that uniquely integrates structural information for both miRNAs and lncRNAs. The database includes extensive characterization of sequences, secondary structures, and interactions, enhancing its utility for predictive modeling in bioinformatics and systems biology. By providing a validated and detailed resource, such as lncRNASNP2-Human, this database aims to support and improve future predictions of miRNA-lncRNA interactions, with potential applications in disease research, particularly in cancer, and other areas of biomedical science. The construction and structure of the database are presented, along with a detailed description of the types of data it contains, and potential applications or uses of this database are mentioned at the end.",

keywords = "database, interaction characterization, interactions prediction, miRNA-lncRNA interaction, secondary structures, sequence characterization, structural characterization",

author = "Cindy Calder{\'o}n-Arce and Crespo-Marino, \{Juan Luis\} and Rodrigo Mora-Rodriguez",

note = "Publisher Copyright: {\textcopyright} 2024 IEEE.; 42nd IEEE Central America and Panama Convention, CONCAPAN 2024 ; Conference date: 27-11-2024 Through 29-11-2024",

year = "2024",

doi = "10.1109/CONCAPAN63470.2024.10933592",

language = "Ingl{\'e}s",

booktitle = "2024 IEEE 42nd Central America and Panama Convention, CONCAPAN 2024",

publisher = "Institute of Electrical and Electronics Engineers Inc.",

edition = "2024",

}

Calderón-Arce, C, Crespo-Marino, JL & Mora-Rodriguez, R 2024, Structural miRNA-lncRNA Interaction Database: Integrating Structural Insights for Enhanced Predictive Modeling. in 2024 IEEE 42nd Central America and Panama Convention, CONCAPAN 2024. 2024 edn, Institute of Electrical and Electronics Engineers Inc., 42nd IEEE Central America and Panama Convention, CONCAPAN 2024, San Jose, Costa Rica, 27/11/24. https://doi.org/10.1109/CONCAPAN63470.2024.10933592

Structural miRNA-lncRNA Interaction Database: Integrating Structural Insights for Enhanced Predictive Modeling. / Calderón-Arce, Cindy; Crespo-Marino, Juan Luis; Mora-Rodriguez, Rodrigo.
2024 IEEE 42nd Central America and Panama Convention, CONCAPAN 2024. 2024. ed. Institute of Electrical and Electronics Engineers Inc., 2024.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

TY - GEN

T1 - Structural miRNA-lncRNA Interaction Database

T2 - 42nd IEEE Central America and Panama Convention, CONCAPAN 2024

AU - Calderón-Arce, Cindy

AU - Crespo-Marino, Juan Luis

AU - Mora-Rodriguez, Rodrigo

PY - 2024

Y1 - 2024

N2 - This work introduces a comprehensive miRNA-lncRNA interaction database that uniquely integrates structural information for both miRNAs and lncRNAs. The database includes extensive characterization of sequences, secondary structures, and interactions, enhancing its utility for predictive modeling in bioinformatics and systems biology. By providing a validated and detailed resource, such as lncRNASNP2-Human, this database aims to support and improve future predictions of miRNA-lncRNA interactions, with potential applications in disease research, particularly in cancer, and other areas of biomedical science. The construction and structure of the database are presented, along with a detailed description of the types of data it contains, and potential applications or uses of this database are mentioned at the end.

AB - This work introduces a comprehensive miRNA-lncRNA interaction database that uniquely integrates structural information for both miRNAs and lncRNAs. The database includes extensive characterization of sequences, secondary structures, and interactions, enhancing its utility for predictive modeling in bioinformatics and systems biology. By providing a validated and detailed resource, such as lncRNASNP2-Human, this database aims to support and improve future predictions of miRNA-lncRNA interactions, with potential applications in disease research, particularly in cancer, and other areas of biomedical science. The construction and structure of the database are presented, along with a detailed description of the types of data it contains, and potential applications or uses of this database are mentioned at the end.

KW - database

KW - interaction characterization

KW - interactions prediction

KW - miRNA-lncRNA interaction

KW - secondary structures

KW - sequence characterization

KW - structural characterization

UR - https://www.scopus.com/pages/publications/105005847918

U2 - 10.1109/CONCAPAN63470.2024.10933592

DO - 10.1109/CONCAPAN63470.2024.10933592

M3 - Contribución a la conferencia

AN - SCOPUS:105005847918

BT - 2024 IEEE 42nd Central America and Panama Convention, CONCAPAN 2024

PB - Institute of Electrical and Electronics Engineers Inc.

Y2 - 27 November 2024 through 29 November 2024

ER -

Structural miRNA-lncRNA Interaction Database: Integrating Structural Insights for Enhanced Predictive Modeling

Abstract

Conference

UN SDGs

Keywords

Access to Document

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