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A Benchmark of Eye Anterior Image Semantic Segmentation in Scarcely Labeled Datasets

  • Costa Rica Institute of Technology
  • University of Cagliari
  • Cornell University

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Semantic segmentation of anterior-segment ophthalmic images is hampered by scarce pixel-wise annotations. We benchmark three data-efficient training paradigms built on a foundation model: (i) parameter-efficient fine-tuning of Segment Anything (SAM) via LoRA, (ii) weakly supervised learning that converts Grad-CAM activation maps from a ResNet-18 classifier into SAM-prompted pseudo-masks, and (iii) few-shot segmentation using feature-density prototypes. Experiments on the public pupillary segmentation Dataset (299 images) evaluate Intersection over Union (IoU), averaging results over 10 runs per configuration. LoRA achieves the best and most stable performance (mean IoU ≈ 0.97 across N=42-210 labeled masks). The weakly supervised pipeline attains competitive accuracy without pixel-wise labels (peak IoU 0.85 N=168) but is sensitive to thresholding. The few-shot method reaches IoU 0.75 with k=20 masks and offers a viable path when only a handful of annotations are available, albeit with higher variance. These findings delineate a practical 'supervision ladder': use LoRA when tens of masks can be curated; prefer weak supervision when only image-level labels exist; and resort to few-shot learning for minimal mask budgets. Overall, coupling foundation models with annotation-efficient training enables clinically useful ophthalmic segmentation under realistic data scarcity.

Original languageEnglish
Title of host publication2025 IEEE 7th International Conference on BioInspired Processing, BIP 2025
PublisherInstitute of Electrical and Electronics Engineers Inc.
ISBN (Electronic)9798331570149
DOIs
StatePublished - 2025
Event7th IEEE International Conference on BioInspired Processing, BIP 2025 - Perez Zeledon, Costa Rica
Duration: 3 Dec 20255 Dec 2025

Publication series

Name2025 IEEE 7th International Conference on BioInspired Processing, BIP 2025

Conference

Conference7th IEEE International Conference on BioInspired Processing, BIP 2025
Country/TerritoryCosta Rica
CityPerez Zeledon
Period3/12/255/12/25

Keywords

  • Anterior-Segment Imaging
  • Few-Shot Learning
  • Grad-CAM
  • LoRA/QLoRA
  • Ophthalmology
  • Segment Anything Model
  • Semantic Segmentation
  • Weakly Supervised Learning
  • pupillary segmentation

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